CDS

Accession Number TCMCG075C18425
gbkey CDS
Protein Id XP_017977103.1
Location complement(join(39256574..39256784,39257044..39257334,39257955..39258771,39258968..39261014))
Gene LOC18600656
GeneID 18600656
Organism Theobroma cacao

Protein

Length 1121aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA341501
db_source XM_018121614.1
Definition PREDICTED: phytochrome A [Theobroma cacao]

EGGNOG-MAPPER Annotation

COG_category K
Description Regulatory photoreceptor which exists in two forms that are reversibly interconvertible by light the Pr form that absorbs maximally in the red region of the spectrum and the Pfr form that absorbs maximally in the far-red region
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko00001        [VIEW IN KEGG]
KEGG_ko ko:K12120        [VIEW IN KEGG]
EC -
KEGG_Pathway ko04712        [VIEW IN KEGG]
map04712        [VIEW IN KEGG]
GOs GO:0003674        [VIEW IN EMBL-EBI]
GO:0003676        [VIEW IN EMBL-EBI]
GO:0003723        [VIEW IN EMBL-EBI]
GO:0003729        [VIEW IN EMBL-EBI]
GO:0003824        [VIEW IN EMBL-EBI]
GO:0004672        [VIEW IN EMBL-EBI]
GO:0005488        [VIEW IN EMBL-EBI]
GO:0005515        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005634        [VIEW IN EMBL-EBI]
GO:0005654        [VIEW IN EMBL-EBI]
GO:0005737        [VIEW IN EMBL-EBI]
GO:0006417        [VIEW IN EMBL-EBI]
GO:0006464        [VIEW IN EMBL-EBI]
GO:0006468        [VIEW IN EMBL-EBI]
GO:0006793        [VIEW IN EMBL-EBI]
GO:0006796        [VIEW IN EMBL-EBI]
GO:0006807        [VIEW IN EMBL-EBI]
GO:0007154        [VIEW IN EMBL-EBI]
GO:0007165        [VIEW IN EMBL-EBI]
GO:0007275        [VIEW IN EMBL-EBI]
GO:0007602        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0009314        [VIEW IN EMBL-EBI]
GO:0009416        [VIEW IN EMBL-EBI]
GO:0009581        [VIEW IN EMBL-EBI]
GO:0009582        [VIEW IN EMBL-EBI]
GO:0009583        [VIEW IN EMBL-EBI]
GO:0009585        [VIEW IN EMBL-EBI]
GO:0009605        [VIEW IN EMBL-EBI]
GO:0009606        [VIEW IN EMBL-EBI]
GO:0009628        [VIEW IN EMBL-EBI]
GO:0009629        [VIEW IN EMBL-EBI]
GO:0009630        [VIEW IN EMBL-EBI]
GO:0009637        [VIEW IN EMBL-EBI]
GO:0009638        [VIEW IN EMBL-EBI]
GO:0009639        [VIEW IN EMBL-EBI]
GO:0009640        [VIEW IN EMBL-EBI]
GO:0009642        [VIEW IN EMBL-EBI]
GO:0009791        [VIEW IN EMBL-EBI]
GO:0009881        [VIEW IN EMBL-EBI]
GO:0009883        [VIEW IN EMBL-EBI]
GO:0009889        [VIEW IN EMBL-EBI]
GO:0009890        [VIEW IN EMBL-EBI]
GO:0009892        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0010017        [VIEW IN EMBL-EBI]
GO:0010018        [VIEW IN EMBL-EBI]
GO:0010114        [VIEW IN EMBL-EBI]
GO:0010161        [VIEW IN EMBL-EBI]
GO:0010201        [VIEW IN EMBL-EBI]
GO:0010203        [VIEW IN EMBL-EBI]
GO:0010218        [VIEW IN EMBL-EBI]
GO:0010468        [VIEW IN EMBL-EBI]
GO:0010556        [VIEW IN EMBL-EBI]
GO:0010558        [VIEW IN EMBL-EBI]
GO:0010605        [VIEW IN EMBL-EBI]
GO:0010608        [VIEW IN EMBL-EBI]
GO:0010629        [VIEW IN EMBL-EBI]
GO:0016301        [VIEW IN EMBL-EBI]
GO:0016310        [VIEW IN EMBL-EBI]
GO:0016604        [VIEW IN EMBL-EBI]
GO:0016740        [VIEW IN EMBL-EBI]
GO:0016772        [VIEW IN EMBL-EBI]
GO:0016773        [VIEW IN EMBL-EBI]
GO:0017148        [VIEW IN EMBL-EBI]
GO:0019222        [VIEW IN EMBL-EBI]
GO:0019538        [VIEW IN EMBL-EBI]
GO:0023052        [VIEW IN EMBL-EBI]
GO:0031323        [VIEW IN EMBL-EBI]
GO:0031324        [VIEW IN EMBL-EBI]
GO:0031326        [VIEW IN EMBL-EBI]
GO:0031327        [VIEW IN EMBL-EBI]
GO:0031516        [VIEW IN EMBL-EBI]
GO:0031974        [VIEW IN EMBL-EBI]
GO:0031981        [VIEW IN EMBL-EBI]
GO:0032268        [VIEW IN EMBL-EBI]
GO:0032269        [VIEW IN EMBL-EBI]
GO:0032501        [VIEW IN EMBL-EBI]
GO:0032502        [VIEW IN EMBL-EBI]
GO:0034248        [VIEW IN EMBL-EBI]
GO:0034249        [VIEW IN EMBL-EBI]
GO:0036211        [VIEW IN EMBL-EBI]
GO:0038023        [VIEW IN EMBL-EBI]
GO:0042221        [VIEW IN EMBL-EBI]
GO:0042802        [VIEW IN EMBL-EBI]
GO:0043170        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0043233        [VIEW IN EMBL-EBI]
GO:0043412        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044260        [VIEW IN EMBL-EBI]
GO:0044267        [VIEW IN EMBL-EBI]
GO:0044422        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044428        [VIEW IN EMBL-EBI]
GO:0044446        [VIEW IN EMBL-EBI]
GO:0044451        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0046685        [VIEW IN EMBL-EBI]
GO:0048519        [VIEW IN EMBL-EBI]
GO:0048523        [VIEW IN EMBL-EBI]
GO:0048856        [VIEW IN EMBL-EBI]
GO:0050789        [VIEW IN EMBL-EBI]
GO:0050794        [VIEW IN EMBL-EBI]
GO:0050896        [VIEW IN EMBL-EBI]
GO:0051171        [VIEW IN EMBL-EBI]
GO:0051172        [VIEW IN EMBL-EBI]
GO:0051246        [VIEW IN EMBL-EBI]
GO:0051248        [VIEW IN EMBL-EBI]
GO:0051606        [VIEW IN EMBL-EBI]
GO:0051716        [VIEW IN EMBL-EBI]
GO:0055122        [VIEW IN EMBL-EBI]
GO:0060089        [VIEW IN EMBL-EBI]
GO:0060255        [VIEW IN EMBL-EBI]
GO:0065007        [VIEW IN EMBL-EBI]
GO:0070013        [VIEW IN EMBL-EBI]
GO:0071214        [VIEW IN EMBL-EBI]
GO:0071478        [VIEW IN EMBL-EBI]
GO:0071482        [VIEW IN EMBL-EBI]
GO:0071489        [VIEW IN EMBL-EBI]
GO:0071490        [VIEW IN EMBL-EBI]
GO:0071491        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0080090        [VIEW IN EMBL-EBI]
GO:0097159        [VIEW IN EMBL-EBI]
GO:0104004        [VIEW IN EMBL-EBI]
GO:0140096        [VIEW IN EMBL-EBI]
GO:1901363        [VIEW IN EMBL-EBI]
GO:1901564        [VIEW IN EMBL-EBI]
GO:2000112        [VIEW IN EMBL-EBI]
GO:2000113        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGTCTTCTTCAAGGCCAAGTCATTCATCTAGCAACTCTGGGAGATCAAGGCACAGTGCCAGGATTATTGCTCAAACCACAGTTGATGCAAAACTCCATGCAAATTTTGAGGAGTCCGGTAGCTCCTTTGACTATTCAAGTTCAGTGCGTGCAAGTGGAGACCAGCAATCTAGGTCAGACAGGGTTACCACAGCTTATCTCCATCAAATACAGAAAGGCAAATTCATCCAACCCTTTGGGTGCTTGCTAGCCTTAGATGAGAAAACTTACAAGGTCATAGCATACAGTGAGAATGCCCCTGAAATGTTGACCATGGTTAGTCATGCAGTCCCAAGTGTTGGGGACCACCCAGTTCTTGGCATTGGAACTGACATAAAAACTATTTTCACAGCCCCCAGTTCCTCTGCATTGCTAAAGGCCCTAGGAATTGGGGAGGTTTCTCTTTTGAATCCAATCTTGGTCCATTGCAAGACTTCTGGGAAGCCCTTTTACGCAATAATCCATCGGGTAACAGGGAGCTTGATCATTGATTTTGAACCTGTGAAGCCCTATGAAGTTCCCATGACTGCTGCTGGGGCCTTGCAGTCATACAAGCTAGCGGCAAAAGCAATTACTCGCTTGCAGTCTCTGCCTAGTGGTAGCATGGAAAGGCTTTGTGATACAATGGTGCAGGAGGTTTTTGAACTCACTGGTTATGACAGGGTGATGGCCTATAAATTTCACGATGACGACCATGGGGAAGTGGTTTCTGAGATAACAAAGCCAGGCCTAGAGCCTTACTTAGGTTTGCATTATCCAGCCACTGATATCCCTCAGGCTGCTCGATTTTTGTTTATGAAGAATAAAGTCCGCATGATTGTTGATTGCCGCGCAAAACATGTAAAAGTATTTCAAGATGATAAGCTTGCTTTTGACCTAACCTTGTGTGGTTCAACCCTAAGGGCCCCACACAGCTGCCATTTACAGTATATGGAGAACATGAATTCCATTGCTTCTCTGGTTATGGCTGTTATTGTCAATGATGGAGATGAAGAGGGCGATGGCCCTGATTCTGCACAGCCACAGCAAAAAAGAAAGAGACTGTGGGGTTTGGTAGTGTGCCATAACACCACTCCTAGGTTTGTTCCATTCCCCCTCAGGTATGCCTGTGAATTTCTAGCTCAAGTCTTTGCCATCCATGTCAATAAGGAGATAGAGTTGGAAAATCAAATTATCGAGAAGAATATTCTGCGTACCCAGACCCTTTTGTGTGATATGCTTTTGCGGGATGCACCCATGGGCATTATCTCACAAAGCCCAAACATAATGGATTTGGTGAAATGTGATGGGGCTGCATTATTATACAAGAACAAAATATGGAAACTAGGAGTAACTCCTAGTGATTTCCAGCTGCATGAGATAGCATCATGGCTTTCTGAGTATCATATGGATTCCACAGGTCTGAGTACTGATAGCTTGTATGATGCTGGGTTCCCAGGGGCATTGGCTCTTGGTGATGTAGTATGTGGAATGGCAGCTGTGAGGATAACCCTCAAGGATATGCTTTTCTGGTTCCGGTCCCATACTGCTGCAGAAATTCGATGGGGTGGTGCAAAGCATGAACCTGGTGAGAAGGATGATGGCAGGAAGATGCACCCAAGGTCATCATTCAAGGCTTTCCTCCAAGTTGTCAAGACAAGGAGTATGCCATGGAAGGACTATGAAATGGATGCAATCCATTCTTTGCAGCTTATTCTAAGGAATGCATTCAAAGATGTTGAGACCACAGATACTAACACTAGTGCCATACATTCAAAGCTCAGTGACCTCAAAATAGAAGGGATGCAAGAACTGGAGGCAGTGACAAGTGAGATGGTTCGTTTAATTGAAACAGCGACAGTGCCAATTTTGGCTGTTGATGTTGATGGCTTGGTTAATGGGTGGAATATGAAAATTGCCGAGTTGACTGGTCTTCCTGTTGATAAAGCAATTGGAAAGCATTTACTCTCACTTGTTGAAGATTCTTCTGTTGAAACTGTCAAGCAAATGTTAGTACTGGCATTGCAGGGCAAGGAAGAAAAGAACATCCAATTTGAGATCAAAACTCATGGGTCAAGGATTGAGGCTGGCCCCATCAGTTTAGTTGTCAATGCTTGTGCAAACAGGGATCTTCACGAAAATGTTGTGGGGGTTTGTTTTGTGGCACAAGATATAACTGGTCAGAAGATTGTCATGGACAAATTCACCCGGATTGAAGGTGATTACAAAGCAATTGTACAAAATCCAAACCCACTGATTCCTCCCATATTTGGTATGGATGAATTTGGCTGGTGCTCTGAGTGGAATCCAGCTATGACGAAGTTAACTGGGTGGAAGCGAGACGAAGTGGTAGATAAAATGCTGTTGGGGGAGGTTTTTGGGACCCACATTGCATGCTGTCGTCTCAAGAGTCAAGAATCTTTTGTCAATCTTGGTGTTGTACTTAATAATGCCATGACTGGTCATGAGCCTGAAAAGGTTCCTTTTGGTTTCTTTGCTCGCAGTGGAAAGTATGTGGAATGCTTGTTATGTGTAAATAAGAAATTGGACAGAGAGGATGCTGTCACTGGTGTCTTTTGTTTCTTGCAGCTGGCAAGCCATGAGCTACAACAAGCACTTCATGTCCAGCGATTATCAGAGCAAACTGCCATGAAAAGATTGAAAGCATTAGCTTATCTGAAAAGGCAGATCCGTAATCCTCTCTCTGGGATTATTTTTTCAAGGAAAATGATGGAGGGCACAGAATTGGGACCAGAACAAAAACGCCTTCTGCAGACTAGTACCCTGTGCCAGCGCCAGCTCAGCAAAATACTTGATGATTCAGATCTTGATAGCATCATTGACGGCTACTTGGATCTTGAAATGATTGACTTCACCCTGCATGAGGTATTGGTTGCTTCTATTAGTCAAGTGATGATGAAGAGCAATGGGAAAGGTATCCGCATAGTCAATGATACAGAAGAAGAGGTCATGACTGAGACCTTGTATGGAGACAGTGTTAGACTTCAACAGGTCTTGGCTGATTTCTTGTTGATATCAGTTAATTTTACACCAAATGGAGGCCAACTTGTTGTTGTAGCTAGCTTGACCAAAGATCAACTTGGACAGTCAGTTCATCTTGCACATTTGGAGCTCAGGATAACACATGCAGGTGGCGGAGTGCCAGAAGCATTGCTGAGCCAAATGTTTGGAAGTGATGGAGATGCATCAGAGGAGGGTATCAGTTTGCTCATCAGCCGAAAGTTGGTAAAACTCATGAATGGAGATATCCAGTATTTAAGGGAAGCAGGCAGGTCAACTTTCATCGTGACCGTCGAACTAGCTGCAGCAAATAGGTCCAGAACCTAA
Protein:  
MSSSRPSHSSSNSGRSRHSARIIAQTTVDAKLHANFEESGSSFDYSSSVRASGDQQSRSDRVTTAYLHQIQKGKFIQPFGCLLALDEKTYKVIAYSENAPEMLTMVSHAVPSVGDHPVLGIGTDIKTIFTAPSSSALLKALGIGEVSLLNPILVHCKTSGKPFYAIIHRVTGSLIIDFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVMAYKFHDDDHGEVVSEITKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRAKHVKVFQDDKLAFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVIVNDGDEEGDGPDSAQPQQKRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKEIELENQIIEKNILRTQTLLCDMLLRDAPMGIISQSPNIMDLVKCDGAALLYKNKIWKLGVTPSDFQLHEIASWLSEYHMDSTGLSTDSLYDAGFPGALALGDVVCGMAAVRITLKDMLFWFRSHTAAEIRWGGAKHEPGEKDDGRKMHPRSSFKAFLQVVKTRSMPWKDYEMDAIHSLQLILRNAFKDVETTDTNTSAIHSKLSDLKIEGMQELEAVTSEMVRLIETATVPILAVDVDGLVNGWNMKIAELTGLPVDKAIGKHLLSLVEDSSVETVKQMLVLALQGKEEKNIQFEIKTHGSRIEAGPISLVVNACANRDLHENVVGVCFVAQDITGQKIVMDKFTRIEGDYKAIVQNPNPLIPPIFGMDEFGWCSEWNPAMTKLTGWKRDEVVDKMLLGEVFGTHIACCRLKSQESFVNLGVVLNNAMTGHEPEKVPFGFFARSGKYVECLLCVNKKLDREDAVTGVFCFLQLASHELQQALHVQRLSEQTAMKRLKALAYLKRQIRNPLSGIIFSRKMMEGTELGPEQKRLLQTSTLCQRQLSKILDDSDLDSIIDGYLDLEMIDFTLHEVLVASISQVMMKSNGKGIRIVNDTEEEVMTETLYGDSVRLQQVLADFLLISVNFTPNGGQLVVVASLTKDQLGQSVHLAHLELRITHAGGGVPEALLSQMFGSDGDASEEGISLLISRKLVKLMNGDIQYLREAGRSTFIVTVELAAANRSRT